Tools from our lab's research and collaborations

Please visit our Parker Lab GitHub Page to see a full list of tools, including those that are under active development and not yet published.

A toolkit for measuring and comparing ATAC-seq results. Provides in-depth QC metrics, visualizations, and downloadable metrics. [DOI]

A highly scalable GPU-accelerated de novo motif discovery software package. [DOI]

Tool for exploring variants in islet expression quantitative trait loci. The data is the result of a collaboration between our lab, the Department of Biostatistics and Center for Statistical Genetics at the University of Michigan, the National Human Genome Research Institute, the Jackson Laboratory for Genomic Medicine, the Department of Genetics at the University of North Carolina, the European Bioinformatics Institute, the Department of Preventive Medicine at the University of Southern California, and the Department of Physiology and Biophysics at the University of Southern California.